GI in the Immunocompromised Host
Solid-organ transplant GI (CMV, PTLD, post-transplant GVHD), HIV GI manifestations stratified by CD4, checkpoint-inhibitor colitis per NCCN and SITC, neutropenic enterocolitis decisions, GI graft-versus-host disease grading and management, and CAR-T toxicity.
- Audio chapterSingle-voice audio, listen on the commute.
- ABIM-format MCQs5-option vignettes with full wrong-answer teaching.
- Study guideTables, decision trees, primary sources.
- AI tutorChapter-grounded, answers the question you're stuck on.
What this chapter covers
- Section 34.1: Solid organ transplant GI disease
Solid organ transplant recipients carry a five-drug differential at every GI symptom: cytomegalovirus, mycophenolate enteropathy, calcineurin inhibitor toxicity, post-transplant lymphoproliferative disorder driven by Epstein-Barr virus, and Clostridioides difficile.
- Section 34.2: HCT and acute gut graft-versus-host disease
Approximately 20,000 allogeneic hematopoietic cell transplants are performed in the United States each year.
- Section 34.3: HIV host framework and HIV-era GI
This section focuses on the HIV host framework and the GI presentations that are framework-driven rather than pathogen-specific.
- Section 34.4: Checkpoint inhibitor colitis
Immune checkpoint inhibitors targeting CTLA-4 (ipilimumab, tremelimumab) and PD-1 or PD-L1 (nivolumab, pembrolizumab, cemiplimab, atezolizumab, durvalumab) unleash T-cell responses against tumor antigens but also against self tissue.
- Section 34.5: Checkpoint inhibitor hepatitis and other irAEs
Checkpoint inhibitor hepatitis affects approximately 4 to 9 percent of patients on anti-CTLA-4 monotherapy, 1 to 4 percent on anti-PD-1 or anti-PD-L1 monotherapy, and up to 18 percent on combination ipilimumab plus nivolumab.
- Section 34.6: Neutropenic enterocolitis (typhlitis)
Neutropenic enterocolitis presents in patients with absolute neutrophil count below 500 cells per microliter (especially under 100) receiving cytotoxic chemotherapy, most often during acute leukemia induction (cytarabine for acute myeloid leukemia, intensive regimens for pediatric acute lymphoblastic leukemia).
Podcast episodes
- 01
Solid Organ Transplant GI Disease
Episode one of the GI in the Immunocompromised Host chapter starts with a single recognition move: a transplant recipient on calcineurin inhibitor plus mycophenolate plus prednisone with diarrhea could be any of five entities at once, and time since transplant is the variable that reorders the differential. The first month belongs to the surgeon, the one-to-twelve-month window belongs to opportunistic infection, and beyond a year belongs to cumulative toxicity and malignancy. From there the reasoning runs on enzymes: donor-recipient serostatus and UL97 versus UL54 for CMV resistance, CYP3A4 for the calcineurin inhibitor trap, and dose-dependent crypt exposure for mycophenolate enteropathy. Sitting over all of it, Epstein-Barr virus drives the post-transplant lymphoproliferative disorder that responds first to reducing the immunosuppression that allowed it.
Read the transcript → - 02
Hematopoietic Cell Transplant Gut GVHD
Episode two takes the other host state hiding behind the word transplant: the hematopoietic cell transplant recipient whose donor immune system attacks the host. The post-transplant timeline organizes everything, with the first twenty-one days belonging to conditioning toxicity rather than graft-versus-host disease, so the timeline decides which diagnosis is even allowed. Gut disease is staged by daily stool volume on the Glucksberg-Seattle thresholds, the histology anchors on crypt apoptosis, and the biopsy-bench differential always includes CMV because apoptosis is not pathognomonic. Treatment is methylprednisolone first and ruxolitinib second on the strength of a randomized trial, and the shared move across both host states is to pair every immunosuppression escalation with an infectious workup.
Read the transcript → - 03
HIV GI Disease and Typhlitis
Episode three covers the non-transplant immunocompromised GI host, where two settings that look unrelated share one logic: identify the host state, and the host state opens a tiered differential. In HIV that state is the CD4 count, which converts a long pathogen list into strata that drive workup and surfaces the pre-antiretroviral-era entities still seen in late presenters, AIDS cholangiopathy, gut Kaposi sarcoma, and post-treatment IRIS. In chemotherapy-related neutropenia that state is the absolute neutrophil count, which defines typhlitis as a cecum-predominant enterocolitis managed conservatively with bowel rest and broad-spectrum antibiotics. The recurring move is that the number tells you what to look for and the entity tells you what to do, from antiretroviral therapy as the dominant intervention to the narrow list of surgical indications.
Read the transcript → - 04
Immune Checkpoint Inhibitor Toxicity
Episode four closes the module on checkpoint inhibitor toxicity, one entity with many organ targets, where releasing the brakes on T cells means the same cells recognize self. Drug class predicts the toxicity rate, with anti-CTLA-4 broad and severe, anti-PD-1 focal and milder, and combination highest, while grade drives therapy through a universal seventy-two-hour escalation window. The colitis algorithm runs grade-based steroids then infliximab or vedolizumab, with the choice turning on hepatic comorbidity and CMV risk. The single most tested distinction is that steroid-refractory hepatitis goes to mycophenolate mofetil, not infliximab, because infliximab is contraindicated by its own hepatotoxicity, and the whole framework extends to pneumonitis, endocrinopathies, and the other immune-related adverse events.
Read the transcript →
Key topics
- The five-entity transplant diarrhea differential
- Time since transplant as the organizing variable
- CMV serostatus stratification and valganciclovir prophylaxis
- CMV colitis diagnosis and base-of-ulcer biopsy
- Ganciclovir resistance and the UL97 versus UL54 pathway
- Mycophenolate enteropathy and its histologic mimics
- Calcineurin inhibitor toxicity and CYP3A4 drug interactions
- Post-transplant lymphoproliferative disorder and EBV
- The post-transplant timeline and conditioning toxicity
- Sinusoidal obstruction syndrome and defibrotide
- Acute GVHD target organs and prognosis
- Glucksberg-Seattle gut staging by stool volume
- Crypt apoptosis histology and the Lerner system
- The biopsy-bench differential and CMV overlap
- Steroids first and steroid-refractory definition
- Ruxolitinib and mechanism-matched later agents
- CD4 count as the HIV recognition anchor
- CD4-stratified opportunistic infection tiers
- AIDS cholangiopathy and papillary stenosis
- GI Kaposi sarcoma and HHV-8
- Immune reconstitution inflammatory syndrome
- Antiretroviral timing and the cryptococcal exception
- Typhlitis pathogenesis and the recognition triad
- Conservative management and surgical indications
- Checkpoint biology and the CTLA-4 versus PD-1 distinction
- Colitis rates by drug class and onset windows
- Colitis recognition, mimics, and endoscopic predictors
- Grade-based colitis management and the seventy-two-hour window
- Infliximab versus vedolizumab and CMV risk
- Checkpoint hepatitis workup and the autoimmune contrast